Summary in QTL8_chr1-281979083-283954807

QTL summarization criteria for whole -genome GWAS

Parameters and pipeline for filtering traits

QTL statistics table

QTL Statistics
QTL position 1:281979083-283954807
Peak SNP ID and position chr1.s_283230586, chr1.s_283230586
Number of total genes in the QTL 52
Enrichment significance vs background 1.43e-10

List of total genes in the QTL

Gene ID Alias ID Position Function
Zm00001d034038 Zm00001d034038 1:281978994-281984348:- Cyclomaltodextrin glucanotransferase
Zm00001d034039 Zm00001d034039 1:282003389-282005745:- Two-pore potassium channel 1
Zm00001d034040 Zm00001d034040 1:282017807-282021166:+ Probable calcium-binding protein CML27
Zm00001d034041 Zm00001d034041 1:282018859-282019712:- Zm00001d034041
Zm00001d034042 Zm00001d034042 1:282032119-282033154:- Zm00001d034042
Zm00001d034043 Zm00001d034043 1:282043067-282045983:- Probable calcium-binding protein CML27
Zm00001d034044 Zm00001d034044 1:282124294-282136129:+ Zm00001d034044
Zm00001d034045 Zm00001d034045 1:282136174-282165980:- Agamous-like MADS-box protein AGL8
Zm00001d034046 Zm00001d034046 1:282186897-282190194:- DUF247 domain protein
Zm00001d034047 Zm00001d034047 1:282303560-282312748:- Zea mays MADS24
Zm00001d034048 Zm00001d034048 1:282391967-282393408:+ Cytochrome b5 isoform A
Zm00001d034049 Zm00001d034049 1:282394751-282399544:- Brittle stalk-2-like protein 3
Zm00001d034050 Zm00001d034050 1:282500016-282508569:+ Mitochondrial substrate carrier family protein
Zm00001d034051 Zm00001d034051 1:282578758-282581214:- Vacuolar protein sorting-associated protein 41 homolog
Zm00001d034052 Zm00001d034052 1:282586095-282587777:- methionine gamma-lyase
Zm00001d034054 Zm00001d034054 1:282590171-282597565:+ Cleavage stimulation factor subunit 50
Zm00001d034055 Zm00001d034055 1:282598451-282608453:+ Protein kinase superfamily protein
Zm00001d034057 Zm00001d034057 1:282650778-282651943:+ Regulator of Vps4 activity in the MVB pathway protein
Zm00001d034058 Zm00001d034058 1:282687133-282721026:+ Regulator of Vps4 activity in the MVB pathway protein
Zm00001d034059 Zm00001d034059 1:282747831-282749777:+ 60S ribosomal protein L13a-1
Zm00001d034060 Zm00001d034060 1:282833605-282835547:+ Zm00001d034060
Zm00001d034061 Zm00001d034061 1:282848983-282849748:- Zm00001d034061
Zm00001d034062 Zm00001d034062 1:282851673-282854411:- PLASMODESMATA CALLOSE-BINDING PROTEIN 2
Zm00001d034063 Zm00001d034063 1:282857083-282860638:- Expressed protein%3B Expressed protein (Having alternative splicing)%3B protein
Zm00001d034064 Zm00001d034064 1:282937656-282941591:+ PTD008 protein
Zm00001d034066 Zm00001d034066 1:283054694-283059073:+ 7-deoxyloganetin glucosyltransferase
Zm00001d034067 Zm00001d034067 1:283065588-283066967:+ UDP-glucose:p-hydroxymandelonitrile-O-glucosyltransferase
Zm00001d034068 Zm00001d034068 1:283075494-283077341:+ 7-deoxyloganetin glucosyltransferase
Zm00001d034069 Zm00001d034069 1:283080493-283082448:+ 7-deoxyloganetin glucosyltransferase
Zm00001d034070 Zm00001d034070 1:283087285-283090408:- Zinc finger CCCH domain-containing protein 46
Zm00001d034071 Zm00001d034071 1:283091813-283092449:- Peptidyl-prolyl cis-trans isomerase CYP20-3 chloroplastic
Zm00001d034072 Zm00001d034072 1:283163311-283164753:+ UDP-glucose 6-dehydrogenase
Zm00001d034073 Zm00001d034073 1:283193730-283197425:- Probable WRKY transcription factor 57
Zm00001d034074 Zm00001d034074 1:283220928-283230016:- maltodextrin phosphorylase; Zm00001d034074_T005.1
Zm00001d034075 Zm00001d034075 1:283306413-283307430:+ zeaxanthin dioxygenase; lycopene dioxygenase
Zm00001d034076 Zm00001d034076 1:283401534-283408034:+ Cyclic nucleotide-gated ion channel 2
Zm00001d034077 Zm00001d034077 1:283422354-283423470:- Zm00001d034077
Zm00001d034078 Zm00001d034078 1:283436255-283455157:- ATP-dependent DNA helicase [Source:UniProtKB/TrEMBL%3BAcc:A0A1D6L5B8]
Zm00001d034080 Zm00001d034080 1:283562217-283579999:+ Zm00001d034080
Zm00001d034081 Zm00001d034081 1:283569286-283578833:+ Nucleotide binding protein
Zm00001d034082 Zm00001d034082 1:283604361-283606746:+ OsWRKY4 - Superfamily of TFs having WRKY and zinc finger domains
Zm00001d034083 Zm00001d034083 1:283634393-283638135:+ Zm00001d034083
Zm00001d034084 Zm00001d034084 1:283648741-283651017:+ Probable WRKY transcription factor 10
Zm00001d034085 Zm00001d034085 1:283651338-283654633:- Expressed protein%3B protein
Zm00001d034087 Zm00001d034087 1:283670581-283672729:+ Origin of replication complex subunit 5
Zm00001d034088 Zm00001d034088 1:283675912-283680018:- Phosphoenolpyruvate/phosphate translocator 2 chloroplastic
Zm00001d034089 Zm00001d034089 1:283693163-283695688:- Probable receptor-like protein kinase
Zm00001d034090 Zm00001d034090 1:283713064-283714392:- Protein-O-fucosyltransferase 1
Zm00001d034091 Zm00001d034091 1:283764415-283767039:+ Transcription factor bHLH113
Zm00001d034092 Zm00001d034092 1:283790845-283794259:+ Zm00001d034092
Zm00001d034093 Zm00001d034093 1:283882582-283886693:- Zm00001d034093
Zm00001d034095 Zm00001d034095 1:283893649-283895468:+ isoflavone 2'-hydroxylase; Isoflavone 2'-hydroxylase; pseudobaptigenin,NADPH:oxygen oxidoreductase (2-hydroxylating)